This service retrieves an article from PubMed Central using PubMed Central APIs, and generates an RDF representation thereof. The article is identified by its PubMed identifier (PMID) provided using property bibo:pmid.

The graph produced relies mainly on the Bibiographic Ontology (BIBO) and FRBR-aligned Bibliographic Ontology (FaBiO). An article IRI is preferably based on its DOI, if any, prefixed with http://doi.org/. If no DOI is available, the IRI is PubMed's web page URL prefixed with https://pubmed.ncbi.nlm.nih.gov/. Authors are represented as separate triples with dct:creator, as well as an ordered list with bibo:authorList.

See modeling details.

Canonical URL

https://sparql-micro-services.org/service/pubmed/getArticleByPMId_sd/

Input argument

PubMed identifier. Mandatory.
Passed as the object of predicate http://purl.org/ontology/bibo/pmid.
Example value: 22368089

Service Description graph

https://sparql-micro-services.org/service/pubmed/getArticleByPMId_sd/ServiceDescription

SHACL shapes graph

SPARQL query

prefix bibo:   <http://purl.org/ontology/bibo/>
SELECT * WHERE {
    ?article bibo:pmid "27607596"; ?p ?o.
}
                    

Output format application/sparql-results+json application/sparql-results+xml application/ld+json text/turtle application/rdf+xml

  Submit query